writeGMT: Write GMT file
In WubingZhang/MAGeCKFlute: Integrative Analysis Pipeline for Pooled CRISPR Functional Genetic Screens
writeGMT R Documentation
Write GMT file
Description
write data frame to a gmt file
Usage
writeGMT(gene2path, gmtfile)
Arguments
gene2path
A data frame. The columns should be Gene, Pathway ID, and Pathway Name.
gmtfile
Path to gmt file.
Value
Output gmt file to local folder.
Author(s)
Wubing Zhang
Examples
gene2path = gsGetter(type = "Complex")
# writeGMT(gene2path, "Protein_complex.gmt")
WubingZhang/MAGeCKFlute documentation built on Jan. 27, 2024, 2:43 p.m.
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| writeGMT | R Documentation |
Write GMT file
Description
write data frame to a gmt file
Usage
writeGMT(gene2path, gmtfile)
Arguments
gene2path |
A data frame. The columns should be Gene, Pathway ID, and Pathway Name. |
gmtfile |
Path to gmt file. |
Value
Output gmt file to local folder.
Author(s)
Wubing Zhang
Examples
gene2path = gsGetter(type = "Complex")
# writeGMT(gene2path, "Protein_complex.gmt")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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