This package performs Cellular DNA Barcode (genetic lineage tracing) analysis. The package can handle all kinds of DNA barcodes, as long as the barcode within a single sequencing read and has a pattern which can be matched by a regular expression. This package can handle barcode with flexible length, with or without UMI (unique molecular identifier). This tool also can be used for pre-processing of some amplicon data such as CRISPR gRNA screening, immune repertoire sequencing and meta genome data.
Package details |
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Bioconductor views | CRISPR Preprocessing QualityControl Sequencing |
Maintainer | |
License | MIT + file LICENSE |
Version | 0.99.9 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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