julian-gehring/Rariant: Identification and Assessment of Single Nucleotide Variants through Shifts in Non-Consensus Base Call Frequencies
The 'Rariant' package identifies single nucleotide variants from sequencing data based on the difference of binomially distributed mismatch rates between matched samples.
Getting started
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Package details |
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| Author | Julian Gehring, Simon Anders, Bernd Klaus (EMBL Heidelberg) |
| Bioconductor views | GenomicVariation Sequencing SomaticMutation StatisticalMethod VariantDetection Visualization |
| Maintainer | Julian Gehring <julian.gehring@embl.de> |
| License | GPL-3 |
| Version | 1.7.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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