CNAnorm: A normalization method for Copy Number Aberration in cancer samples
Version 1.22.1

Performs ratio, GC content correction and normalization of data obtained using low coverage (one read every 100-10,000 bp) high troughput sequencing. It performs a "discrete" normalization looking for the ploidy of the genome. It will also provide tumour content if at least two ploidy states can be found.

Getting started

Package details

AuthorStefano Berri <>, Henry M. Wood <>, Arief Gusnanto <>
Bioconductor views CopyNumberVariation Coverage DNASeq GenomicVariation Normalization Sequencing WholeGenome
MaintainerStefano Berri <>
Package repositoryView on Bioconductor
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CNAnorm documentation built on May 31, 2017, 11:41 a.m.