AneuFinder: Analysis of Copy Number Variation in Single-Cell-Sequencing Data

AneuFinder implements functions for copy-number detection, breakpoint detection, and karyotype and heterogeneity analysis in single-cell whole genome sequencing and strand-seq data.

Package details

AuthorAaron Taudt, Bjorn Bakker, David Porubsky
Bioconductor views CopyNumberVariation GenomicVariation HiddenMarkovModel Sequencing SingleCell Software WholeGenome
MaintainerAaron Taudt <[email protected]>
LicenseArtistic-2.0
Version1.10.1
URL https://github.com/ataudt/aneufinder.git
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("AneuFinder")

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AneuFinder documentation built on Nov. 18, 2018, 6 p.m.