AneuFinder: Analysis of Copy Number Variation in Single-Cell-Sequencing Data

AneuFinder implements functions for copy-number detection, breakpoint detection, and karyotype and heterogeneity analysis in single-cell whole genome sequencing and strand-seq data.

Package details

AuthorAaron Taudt, Bjorn Bakker, David Porubsky
Bioconductor views CopyNumberVariation GenomicVariation HiddenMarkovModel ImmunoOncology Sequencing SingleCell Software WholeGenome
MaintainerAaron Taudt <aaron.taudt@gmail.com>
LicenseArtistic-2.0
Version1.16.0
URL https://github.com/ataudt/aneufinder.git
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("AneuFinder")

Try the AneuFinder package in your browser

Any scripts or data that you put into this service are public.

AneuFinder documentation built on April 29, 2020, 4:14 a.m.