plot.aneuHMM: Plotting function for 'aneuHMM' objects

In AneuFinder: Analysis of Copy Number Variation in Single-Cell-Sequencing Data

Description

Make different types of plots for aneuHMM objects.

Usage

## S3 method for class 'aneuHMM'
plot(x, type = "profile", ...)

Arguments

x	An aneuHMM object.
type	Type of the plot, one of c('profile', 'histogram', 'karyogram'). You can also specify the type with an integer number. karyogram A karyogram-like chromosome overview with CNV-state. histogram A histogram of binned read counts with fitted mixture distribution. karyogram An profile with read counts and CNV-state.
...	Additional arguments for the different plot types.

Value

A ggplot object.

AneuFinder documentation built on Nov. 8, 2020, 7:44 p.m.