AneuFinder

Analysis of Copy Number Variation in Single-Cell-Sequencing Data

AneuFinder

Analysis of Copy Number Variation in Single-Cell-Sequencing Data

Bioconductor-mirror/AneuFinder

Analysis of Copy Number Variation in Single-Cell-Sequencing Data

ataudt/aneufinder

Analysis of Copy Number Variation in Single-Cell-Sequencing Data

EBSeqHMM

Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments

Bioconductor-mirror/EBSeqHMM

Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments

lengning/EBSeqHMM

Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments

luisas/chromstaR-Influence

Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data

Bioconductor-mirror/chromstaR

Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data

chromstaR

Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data

ataudt/chromstaR

Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data

Bioconductor-mirror/BUMHMM

Computational pipeline for computing probability of modification from structure probing experiment data

alinaselega/BUMHMM

Computational pipeline for computing probability of modification from structure probing experiment data

BUMHMM

Computational pipeline for computing probability of modification from structure probing experiment data

DMCHMM

Differentially Methylated CpG using Hidden Markov Model

shokoohi/DMCHMM

Differentially Methylated CpG using Hidden Markov Model

Bioconductor-mirror/DOQTL

Genotyping and QTL Mapping in DO Mice

DOQTL

Genotyping and QTL Mapping in DO Mice

dmgatti/DOQTL

Genotyping and QTL Mapping in DO Mice

treeHFM

Hidden Factor Graph Models

methimpute

Imputation-guided re-construction of complete methylomes from WGBS data

ataudt/methimpute

Imputation-guided re-construction of complete methylomes from WGBS data

ataudt/popmeth

Imputation-guided re-construction of complete methylomes from WGBS data

Bioconductor-mirror/TitanCNA

Subclonal copy number and LOH prediction from whole genome sequencing of tumours

gavinha/TitanCNA

Subclonal copy number and LOH prediction from whole genome sequencing of tumours

TitanCNA

Subclonal copy number and LOH prediction from whole genome sequencing of tumours

Bioconductor-mirror/STAN

The Genomic STate ANnotation Package

STAN

The Genomic STate ANnotation Package

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