ataudt/aneufinder

Analysis of Copy Number Variation in Single-Cell-Sequencing Data

ataudt/aneufinder

Analysis of Copy Number Variation in Single-Cell-Sequencing Data

AneuFinder

Analysis of Copy Number Variation in Single-Cell-Sequencing Data

Bioconductor-mirror/AneuFinder

Analysis of Copy Number Variation in Single-Cell-Sequencing Data

nuCpos

An R package for prediction of nucleosome positions

lengning/EBSeqHMM

Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments

Bioconductor-mirror/EBSeqHMM

Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments

EBSeqHMM

Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments

luisas/chromstaR-Influence

Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data

Bioconductor-mirror/chromstaR

Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data

ataudt/chromstaR

Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data

chromstaR

Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data

alinaselega/BUMHMM

Computational pipeline for computing probability of modification from structure probing experiment data

BUMHMM

Computational pipeline for computing probability of modification from structure probing experiment data

Bioconductor-mirror/BUMHMM

Computational pipeline for computing probability of modification from structure probing experiment data

DMCHMM

Differentially Methylated CpG using Hidden Markov Model

shokoohi/DMCHMM

Differentially Methylated CpG using Hidden Markov Model

DOQTL

Genotyping and QTL Mapping in DO Mice

dmgatti/DOQTL

Genotyping and QTL Mapping in DO Mice

Bioconductor-mirror/DOQTL

Genotyping and QTL Mapping in DO Mice

treeHFM

Hidden Factor Graph Models

methimpute

Imputation-guided re-construction of complete methylomes from WGBS data

ataudt/methimpute

Imputation-guided re-construction of complete methylomes from WGBS data

ataudt/popmeth

Imputation-guided re-construction of complete methylomes from WGBS data

Jialab-UCR/Hapi

Inference of Chromosome-length Haplotypes using Genomic Data of Single Gamete Cells

Hapi

Inference of Chromosome-Length Haplotypes Using Genomic Data of Single Gamete Cells

zhouzilu/iCNV

Integrated Copy Number Variation detection

iCNV

Integrated Copy Number Variation detection

ATLi2001/titancna

Subclonal copy number and LOH prediction from whole genome sequencing of tumours

gavinha/TitanCNA

Subclonal copy number and LOH prediction from whole genome sequencing of tumours

TitanCNA

Subclonal copy number and LOH prediction from whole genome sequencing of tumours

Bioconductor-mirror/TitanCNA

Subclonal copy number and LOH prediction from whole genome sequencing of tumours

Bioconductor-mirror/STAN

The Genomic STate ANnotation Package

STAN

The Genomic STate ANnotation Package

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