infercnv: Infer Copy Number Variation from Single-Cell RNA-Seq Data

Using single-cell RNA-Seq expression to visualize CNV in cells.

Package details

AuthorTimothy Tickle [aut], Itay Tirosh [aut], Christophe Georgescu [aut, cre], Maxwell Brown [aut], Brian Haas [aut]
Bioconductor views Bayesian CopyNumberVariation Genetics GenomicVariation HiddenMarkovModel SingleCell Software StatisticalMethod StructuralVariation Transcriptomics VariantDetection
MaintainerChristophe Georgescu <[email protected]>
LicenseBSD_3_clause + file LICENSE
Version1.0.2
URL https://github.com/broadinstitute/inferCNV/wiki
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("infercnv")

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infercnv documentation built on May 23, 2019, 2 a.m.