shokoohi/DMCHMM: Differentially Methylated CpG using Hidden Markov Model

A pipeline for identifying differentially methylated CpG sites using Hidden Markov Model in bisulfite sequencing data.

Getting started

Package details

AuthorFarhad Shokoohi
Bioconductor views Coverage DifferentialMethylation HiddenMarkovModel Sequencing
MaintainerFarhad Shokoohi <[email protected]>
LicenseGPL-3
Version1.3.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("shokoohi/DMCHMM")
shokoohi/DMCHMM documentation built on Sept. 6, 2018, 1:55 p.m.