markowetzlab/frenchFISH: Poisson Models for Quantifying DNA Copy-number from FISH Images of Tissue Sections

FrenchFISH comprises a nuclear volume correction method coupled with two types of Poisson models: either a Poisson model for improved manual spot counting without the need for control probes; or a homogenous Poisson Point Process model for automated spot counting.

Getting started

Package details

AuthorAdam Berman, Geoff Macintyre
Bioconductor views BiomedicalInformatics CellBiology Genetics HiddenMarkovModel Preprocessing Software
MaintainerAdam Berman <>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
markowetzlab/frenchFISH documentation built on June 28, 2020, 8:18 p.m.