Man pages for markowetzlab/frenchFISH
Poisson Models for Quantifying DNA Copy-number from FISH Images of Tissue Sections
| areAllNonnegativeIntegers | Helper function to check if all values in the input count... |
| checkAutomaticCountsEstimatesArguments | Helper function to check the arguments input to... |
| checkManualCountsEstimatesArguments | Helper function to check the arguments input to... |
| convertFishalyserCsvToCountMatrix | Function to convert CSV output of the FISHalyseR automatic... |
| generatePPdat | Helper function to convert spot counts and nuclear area... |
| getAutomaticCountsEstimates | FrenchFISH function for generating Poisson point estimates of... |
| getAverageVolumeFrac | Helper function to get the average volume of nucleus sampled... |
| getManualCountsEstimates | FrenchFISH function for generating volume adjusted spot... |
| getMaxVolumeFrac | Helper function to get the maximum possible volume of nucleus... |
| getMinVolumeFrac | Helper function that returns the minimum possible volume of... |
