ataudt/aneufinder: Analysis of Copy Number Variation in Single-Cell-Sequencing Data

AneuFinder implements functions for copy-number detection, breakpoint detection, and karyotype and heterogeneity analysis in single-cell whole genome sequencing and strand-seq data.

Getting started

Package details

AuthorAaron Taudt, Bjorn Bakker, David Porubsky
Bioconductor views CopyNumberVariation GenomicVariation HiddenMarkovModel ImmunoOncology Sequencing SingleCell Software WholeGenome
MaintainerAaron Taudt <aaron.taudt@gmail.com>
LicenseArtistic-2.0
Version1.15.2
URL https://github.com/ataudt/aneufinder.git
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("ataudt/aneufinder")
ataudt/aneufinder documentation built on April 16, 2020, 9:54 a.m.