estimateComplexity: Estimate library complexity

View source: R/binReads.R

estimateComplexityR Documentation

Estimate library complexity

Description

Estimate library complexity using a very simple "Michaelis-Menten" approach.

Usage

estimateComplexity(reads)

Arguments

reads

A GRanges-class object with read fragments. NOTE: Complexity estimation relies on duplicate reads and therefore the duplicates have to be present in the input.

Value

A list with estimated complexity values and plots.


ataudt/aneufinder documentation built on April 18, 2023, 4:20 a.m.