getQC: Obtain a data.frame with quality metrics

Description Usage Arguments Details Value Author(s) Examples

View source: R/qualityMeasures.R

Description

Obtain a data.frame with quality metrics from a list of aneuHMM objects or a list of files that contain such objects.

Usage

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getQC(models)

Arguments

models

A list of GRanges-class or aneuHMM objects or a character vector with files that contain such objects.

Details

The employed quality measures are:

Value

A data.frame with columns

Author(s)

Aaron Taudt

Examples

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## Get a list of HMMs
folder <- system.file("extdata", "primary-lung", "hmms", package="AneuFinderData")
files <- list.files(folder, full.names=TRUE)
df <- getQC(files)

ataudt/aneufinder documentation built on Nov. 21, 2018, 10:10 a.m.