plot.GRanges: Plotting function for binned read counts

Description Usage Arguments Value

View source: R/plotting.R

Description

Make plots for binned read counts from binned.data.

Usage

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## S3 method for class 'GRanges'
plot(x, type = "profile", ...)

Arguments

x

A GRanges-class object with binned read counts.

type

Type of the plot, one of c('profile', 'histogram', 'karyogram'). You can also specify the type with an integer number.

karyogram

A karyogram-like chromosome overview with read counts.

histogram

A histogram of read counts.

profile

An profile with read counts.

...

Additional arguments for the different plot types.

Value

A ggplot object.


ataudt/aneufinder documentation built on Nov. 21, 2018, 10:10 a.m.