rfael0cm/RTIGER: HMM-Based Model for Genotyping and Cross-Over Identification

Our method integrates information from all sequenced samples, thus avoiding loss of alleles due to low coverage. Moreover, it increases the statistical power to uncover sequencing or alignment errors <doi:10.1093/plphys/kiad191>.

Getting started

Package details

Bioconductor views GenomeAnnotation HiddenMarkovModel Sequencing
Maintainer
LicenseGPL (>= 2)
Version2.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("rfael0cm/RTIGER")
rfael0cm/RTIGER documentation built on Oct. 31, 2023, 1:25 p.m.