tfhunter is used to identify plant transcription factors (TFs) from protein sequence data and classify them into families and subfamilies. TFs are identified and classified using profile hidden Markov models for known TF families available on the PFAM database or using pre-built .hmm files that come with this package.
|Bioconductor views||FunctionalGenomics FunctionalPrediction GenomeAnnotation HiddenMarkovModel Sequencing Software Transcription|
|Package repository||View on GitHub|
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