frenchFISH: Poisson Models for Quantifying DNA Copy-number from FISH Images of Tissue Sections

FrenchFISH comprises a nuclear volume correction method coupled with two types of Poisson models: either a Poisson model for improved manual spot counting without the need for control probes; or a homogenous Poisson Point Process model for automated spot counting.

Package details

AuthorAdam Berman, Geoff Macintyre
Bioconductor views BiomedicalInformatics CellBiology Genetics HiddenMarkovModel Preprocessing Software
MaintainerAdam Berman <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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frenchFISH documentation built on Nov. 8, 2020, 6:57 p.m.