RTIGER: HMM-Based Model for Genotyping and Cross-Over Identification

Our method integrates information from all sequenced samples, thus avoiding loss of alleles due to low coverage. Moreover, it increases the statistical power to uncover sequencing or alignment errors <doi:10.1093/plphys/kiad191>.

Package details

AuthorRafael Campos-Martin [cre] (<https://orcid.org/0000-0002-1395-8571>), Sophia Schmickler [aut], Manish Goel [ctb], Korbinian Schneeberger [aut], Achim Tresch [aut]
Bioconductor views GenomeAnnotation HiddenMarkovModel Sequencing
MaintainerRafael Campos-Martin <rfael.mpi@gmail.com>
LicenseGPL (>= 2)
Package repositoryView on CRAN
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RTIGER documentation built on March 31, 2023, 5:41 p.m.