A framework for doing microbial comparative genomics in R. The main purpose of the package is assisting in the creation of pangenome matrices where genes from related organisms are grouped by similarity, as well as the analysis of these data. FindMyFriends provides many novel approaches to doing pangenome analysis and supports a gene grouping algorithm that scales linearly, thus making the creation of huge pangenomes feasible.
|Author||Thomas Lin Pedersen|
|Bioconductor views||Clustering ComparativeGenomics DataRepresentation GenomicVariation GraphAndNetwork SequenceMatching|
|Maintainer||Thomas Lin Pedersen <email@example.com>|
|Package repository||View on GitHub|
Install the latest version of this package by entering the following in R:
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.