Bioconductor-mirror/R3CPET

3CPET: Finding Co-factor Complexes in Chia-PET experiment using a Hierarchical Dirichlet Process

Bioconductor-mirror/R3CPET

3CPET: Finding Co-factor Complexes in Chia-PET experiment using a Hierarchical Dirichlet Process

sirusb/R3CPET

3CPET: Finding Co-factor Complexes in Chia-PET experiment using a Hierarchical Dirichlet Process

R3CPET

3CPET: Finding Co-factor Complexes in Chia-PET experiment using a Hierarchical Dirichlet Process

nethet

A bioconductor package for high-dimensional exploration of biological network heterogeneity

Bioconductor-mirror/nethet

A bioconductor package for high-dimensional exploration of biological network heterogeneity

SQUADD

Add-on of the SQUAD Software

Bioconductor-mirror/SQUADD

Add-on of the SQUAD Software

bhatturam/prius

Affected pathway ranking in differential gene expression analysis

ANF

Affinity Network Fusion for Complex Patient Clustering

BeautyOfWeb/ANF

Affinity Network Fusion for Complex Patient Clustering

Bioconductor-mirror/RamiGO

AmiGO visualize R interface

RamiGO

AmiGO visualize R interface

RTNduals

Analysis of co-regulation and inference of 'dual regulons'

chagasVinicius/RTNduals-alpha

analysis of co-regulatory network motifs and inference of 'dual regulons'.

chagasVinicius/RTNduals

analysis of co-regulatory network motifs and inference of 'dual regulons'.

chagasVinicius/RTNmotifs

analysis of co-regulatory network motifs and inference of 'dual regulons'.

RBGL

An interface to the BOOST graph library

Bioconductor-mirror/RBGL

An interface to the BOOST graph library

Bioconductor-mirror/RDAVIDWebService

An R Package for retrieving data from DAVID into R objects using Web Services API.

RDAVIDWebService

An R Package for retrieving data from DAVID into R objects using Web Services API.

PathwaySplice

An R Package for Unbiased Splicing Pathway Analysis

SCCC-BBC/PathwaySplice

An R Package for Unbiased Splicing Pathway Analysis in RNAseq data

netbiov

A package for visualizing complex biological network

Bioconductor-mirror/netbiov

A package for visualizing complex biological network

Bioconductor/hypergraph

A package providing hypergraph data structures

Bioconductor-mirror/hypergraph

A package providing hypergraph data structures

hypergraph

A package providing hypergraph data structures

Bioconductor-mirror/RefNet

A queryable collection of molecular interactions, from many sources

RefNet

A queryable collection of molecular interactions, from many sources

Bioconductor-mirror/rTRMui

A shiny user interface for rTRM

rTRMui

A shiny user interface for rTRM

azampvd/DrugDiseaseNet

A Systems Biology Approach for Drug Repurposing

Bioconductor-mirror/pathview

a tool set for pathway based data integration and visualization

pathview

a tool set for pathway based data integration and visualization

BowenNCSU/pathview

a tool set for pathway based data integration and visualization

mmoisse/pathview

a tool set for pathway based data integration and visualization

BatchQC

Batch Effects Quality Control Software

Bioconductor-mirror/BatchQC

Batch Effects Quality Control Software

Bioconductor-mirror/birta

Bayesian Inference of Regulation of Transcriptional Activity

birta

Bayesian Inference of Regulation of Transcriptional Activity

paubellot/netbenchmark

Benchmarking of several gene network inference methods

netbenchmark

Benchmarking of several gene network inference methods

Bioconductor-mirror/netbenchmark

Benchmarking of several gene network inference methods

netbenchmark

Benchmarking of several gene network inference methods

markvdwiel/GRridge

Better prediction by use of co-data: Adaptive group-regularized ridge regression

Bioconductor-mirror/GRridge

Better prediction by use of co-data: Adaptive group-regularized ridge regression

GRridge

Better prediction by use of co-data: Adaptive group-regularized ridge regression

jardimViniciusC/BioNetStat

Biological Network Analysis

BioNetStat

Biological Network Analysis

gaggle

Broadcast data between R and Gaggle

Bioconductor-mirror/gaggle

Broadcast data between R and Gaggle

Bioconductor-mirror/GeneNetworkBuilder

Build Regulatory Network from ChIP-chip/ChIP-seq and Expression Data

GeneNetworkBuilder

Build Regulatory Network from ChIP-chip/ChIP-seq and Expression Data

CausalR

Causal network analysis methods

Bioconductor-mirror/CausalR

Causal network analysis methods

Bioconductor-mirror/CHRONOS

CHRONOS: A time-varying method for microRNA-mediated sub-pathway enrichment analysis

CHRONOS

CHRONOS: A time-varying method for microRNA-mediated sub-pathway enrichment analysis

juancholkovich/coexnet

coexnet: An R package to build CO-EXpression NETworks from Microarray Data

gibbslab/coexnet

coexnet: An R package to build CO-EXpression NETworks from Microarray Data

coexnet

coexnet: An R package to build CO-EXpression NETworks from Microarray Data

Bioconductor-mirror/coexnet

coexnet: An R package to build CO-EXpression NETworks from Microarray Data

CEMiTool

Co-expression Modules identification Tool

csbl-usp/CEMiTool

Co-expression Modules identification Tool

QuaternaryProd

Computes the Quaternary Dot Product Scoring Statistic for Signed and Unsigned Causal Graphs

Bioconductor-mirror/QuaternaryProd

Computes the Quaternary Dot Product Scoring Statistic for Signed and Unsigned Causal Graphs

BiGGR

Constraint based modeling in R using metabolic reconstruction databases

Bioconductor-mirror/BiGGR

Constraint based modeling in R using metabolic reconstruction databases

pmpsa-hpc/NPAModels

Contains utils for loading and manipulating two-layers structure network models

RGraph2js

Convert a Graph into a D3js Script

Bioconductor-mirror/RGraph2js

Convert a Graph into a D3js Script

CoRegNet

CoRegNet : reconstruction and integrated analysis of co-regulatory networks

RemyNicolle/CoRegNet

CoRegNet : reconstruction and integrated analysis of co-regulatory
networks

Bioconductor-mirror/CoRegNet

CoRegNet : reconstruction and integrated analysis of co-regulatory
networks

RemyNicolle/CoRegNet-dev

CoRegNet : reconstruction and integrated analysis of co-regulatory
networks

COSNet

Cost Sensitive Network for node label prediction on graphs with highly unbalanced labelings

Bioconductor-mirror/COSNet

Cost Sensitive Network for node label prediction on graphs with highly unbalanced labelings

DART

Denoising Algorithm based on Relevance network Topology

Bioconductor-mirror/DART

Denoising Algorithm based on Relevance network Topology

DEsubs

DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments

balomenos/DEsubs

DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments

Bioconductor-mirror/DEsubs

DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments

diffuStats

Diffusion scores on biological networks

Bioconductor-mirror/diffuStats

Diffusion scores on biological networks

b2slab/diffuStats

Diffusion scores on biological networks

b2slab/diffusion

Diffusion scores on biological networks

RCytoscape

Display and manipulate graphs in Cytoscape

Bioconductor-mirror/RCytoscape

Display and manipulate graphs in Cytoscape

Bioconductor-mirror/RCy3

Display and manipulate graphs in Cytoscape >= 3.3.0

tmuetze/Bioconductor_RCy3_the_new_RCytoscape

Display and manipulate graphs in Cytoscape >= 3.3.0

Bioconductor-mirror/RCyjs

Display and manipulate graphs in cytoscape.js

paul-shannon/RCyjs

Display and manipulate graphs in cytoscape.js

PriceLab/RCyjs

Display and manipulate graphs in cytoscape.js

RCyjs

Display and manipulate graphs in cytoscape.js

ddgraph

Distinguish direct and indirect interactions with Graphical Modelling

Bioconductor-mirror/ddgraph

Distinguish direct and indirect interactions with Graphical Modelling

malhamdoosh/EGSEA

Ensemble of Gene Set Enrichment Analyses

EGSEA

Ensemble of Gene Set Enrichment Analyses

Bioconductor-mirror/EGSEA

Ensemble of Gene Set Enrichment Analyses

apComplex

Estimate protein complex membership using AP-MS protein data

Bioconductor-mirror/apComplex

Estimate protein complex membership using AP-MS protein data

Bioconductor-mirror/qpgraph

Estimation of genetic and molecular regulatory networks from high-throughput genomics data

rcastelo/qpgraph

Estimation of genetic and molecular regulatory networks from high-throughput genomics data

qpgraph

Estimation of genetic and molecular regulatory networks from high-throughput genomics data

EGAD

Extending guilt by association by degree

Bioconductor-mirror/EGAD

Extending guilt by association by degree

sarbal/EGAD

Extending guilt by association by degree

cbg-ethz/TiMEx

Finding Mutually Exclusive Groups of Alterations in Cancer Datasets

Bioconductor-mirror/CEMiTool

Finds Gene Co-expression Modules

antagomir/netresponse

Functional Network Analysis

netresponse

Functional Network Analysis

Bioconductor-mirror/netresponse

Functional Network Analysis

cytoscape/r2cytoscape

Functions for Cytoscape Automation

cytoscape/RCy3

Functions to Access and Control Cytoscape

RCy3

Functions to Access and Control Cytoscape

Bioconductor-mirror/maigesPack

Functions to handle cDNA microarray data, including several methods of data analysis

maigesPack

Functions to handle cDNA microarray data, including several methods of data analysis

aertslab/GENIE3

GEne Network Inference with Ensemble of trees

GENIE3

GEne Network Inference with Ensemble of trees

BioMedR

Generating Various Molecular Representations for Chemicals, Proteins, DNAs/RNAs and Their Interactions

wind22zhu/BioMedR

Generating Various Molecular Representations for Chemicals, Proteins, DNAs/RNAs and Their Interactions

Bioconductor-mirror/BioMedR

Generating Various Molecular Representations for Chemicals, Proteins, DNAs/RNAs and Their Interactions

Bioconductor-mirror/GRENITS

Gene Regulatory Network Inference Using Time Series

GRENITS

Gene Regulatory Network Inference Using Time Series

dongminjung/gsean

Gene Set Enrichment Analysis with Networks

gsean

Gene Set Enrichment Analysis with Networks

GSEABase

Gene set enrichment data structures and methods

Bioconductor-mirror/GSEABase

Gene set enrichment data structures and methods

Bioconductor/GSEABase

Gene set enrichment data structures and methods

hclimente/Rgin

gin in R

Rgin

gin in R

goProfiles

goProfiles: an R package for the statistical analysis of functional profiles

Bioconductor-mirror/goProfiles

goProfiles: an R package for the statistical analysis of functional profiles

alexsanchezpla/goProfiles

goProfiles: an R package for the statistical analysis of functional profiles

GraphAlignment

GraphAlignment

Bioconductor-mirror/GraphAlignment

GraphAlignment

Bioconductor/graph

graph: A package to handle graph data structures

graph

graph: A package to handle graph data structures

Bioconductor-mirror/graph

graph: A package to handle graph data structures

biocGraph

Graph examples and use cases in Bioinformatics

Bioconductor-mirror/biocGraph

Graph examples and use cases in Bioinformatics

Bioconductor-mirror/graphite

GRAPH Interaction from pathway Topological Environment

sales-lab/graphite

GRAPH Interaction from pathway Topological Environment

graphite

GRAPH Interaction from pathway Topological Environment

Bioconductor-mirror/keggorthology

graph support for KO, KEGG Orthology

keggorthology

graph support for KO, KEGG Orthology

GraphAT

Graph Theoretic Association Tests

Bioconductor-mirror/GraphAT

Graph Theoretic Association Tests

martini

GWAS Incorporating Networks

hclimente/martini

GWAS Incorporating Networks

rHVDM

Hidden Variable Dynamic Modeling

Bioconductor-mirror/rHVDM

Hidden Variable Dynamic Modeling

martahidalgo/hipathia

HiPathia: High-throughput Pathway Analysis

babelomics/hipathia

HiPathia: High-throughput Pathway Analysis

hipathia

HiPathia: High-throughput Pathway Analysis

Bioconductor-mirror/rTRM

Identification of transcriptional regulatory modules from PPI networks

rTRM

Identification of transcriptional regulatory modules from PPI networks

Bioconductor-mirror/cellTree

Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

cellTree

Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

dynverse/cellTree

Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

Bioconductor-mirror/predictionet

Inference for predictive networks designed for (but not limited to) genomic data

predictionet

Inference for predictive networks designed for (but not limited to) genomic data

dongminjung/PPInfer

Inferring functionally related proteins using protein interaction networks

Pigengene

Infers biological signatures from gene expression data

Bioconductor-mirror/Pigengene

Infers biological signatures from gene expression data

ScISI

In Silico Interactome

Bioconductor-mirror/ScISI

In Silico Interactome

mirIntegrator

Integrating microRNA expression into signaling pathways for pathway analysis

Bioconductor-mirror/mirIntegrator

Integrating microRNA expression into signaling pathways for pathway analysis

Bioconductor-mirror/ibh

Interaction Based Homogeneity for Evaluating Gene Lists

ibh

Interaction Based Homogeneity for Evaluating Gene Lists

RedeR

Interactive visualization and manipulation of nested networks

Bioconductor-mirror/RedeR

Interactive visualization and manipulation of nested networks

jafarilab/IMMAN

Interlog protein network reconstruction by Mapping and Mining ANalysis

IMMAN

Interlog protein network reconstruction by Mapping and Mining ANalysis

FELLA

Interpretation and enrichment for metabolomics data

b2slab/FELLA

Interpretation and enrichment for metabolomics data

joda

JODA algorithm for quantifying gene deregulation using knowledge

Bioconductor-mirror/joda

JODA algorithm for quantifying gene deregulation using knowledge

cbg-ethz/pathTiMEx

Joint Inference of Mutually Exclusive Driver Pathways and their Progression Dynamics

KEGGgraph

KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor

Bioconductor-mirror/KEGGgraph

KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor

Pi

Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene and Pathway Level

hfang-bristol/Pi

Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene and Pathway Level

Pi

Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene and Pathway Level

Bioconductor-mirror/Pi

Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene, Pathway and Network Level

afukushima/MSEAp

Metabolite Set Enrichment Analysis (MSEA)

MetaboSignal

MetaboSignal: a network-based approach to overlay and explore metabolic and signaling KEGG pathways

Bioconductor-mirror/MetaboSignal

MetaboSignal: a network-based approach to overlay and explore metabolic and signaling KEGG pathways

FindMyFriends

Microbial Comparative Genomics in R

thomasp85/FindMyFriends

Microbial Comparative Genomics in R

Bioconductor-mirror/FindMyFriends

Microbial Comparative Genomics in R

QuackenbushLab/MONSTER

Modeling Network State Transitions from Expression and Regulatory data (MONSTER)

dschlauch/MONSTER

Modeling Network State Transitions from Expression and Regulatory data (MONSTER)

Bioconductor-mirror/MVCClass

Model-View-Controller (MVC) Classes

MVCClass

Model-View-Controller (MVC) Classes

BioMVCClass

Model-View-Controller (MVC) Classes That Use Biobase

Bioconductor-mirror/BioMVCClass

Model-View-Controller (MVC) Classes That Use Biobase

Bioconductor-mirror/paircompviz

Multiple comparison test visualization

paircompviz

Multiple comparison test visualization

Bioconductor-mirror/mvGST

Multivariate and directional gene set testing

johnrstevens/mvGST

Multivariate and directional gene set testing

mvGST

Multivariate and directional gene set testing

Bioconductor-mirror/CORREP

Multivariate Correlation Estimator and Statistical Inference Procedures.

CORREP

Multivariate Correlation Estimator and Statistical Inference Procedures.

Bioconductor-mirror/minet

Mutual Information NETworks

minet

Mutual Information NETworks

NeighborNet

Neighbor_net analysis

NetPathMiner

NetPathMiner for Biological Network Construction, Path Mining and Visualization

Bioconductor-mirror/NetPathMiner

NetPathMiner for Biological Network Construction, Path Mining and Visualization

aiminy/NetPathMiner

NetPathMiner for Biological Network Construction, Path Mining and Visualization

JiantaoShi/NetGPA

Network-based Gene Prioritization Analysis (NetGPA)

JiantaoShi/NetORA

Network-based pathway over-representation analysis (NetORA)

glmSparseNet

Network Centrality Metrics for Elastic-Net Regularized Models

sysbiomed/glmSparseNet

Network Centrality Metrics for Elastic-Net Regularized Models

pmpsa-hpc/NPA

Network Perturbation Amplitude

netReg

Network-Regularized Regression Models

BIMSBbioinfo/netSmooth

Network smoothing for scRNAseq

netSmooth

Network smoothing for scRNAseq

Bioconductor/pkgDepTools

Package Dependency Tools

pkgDepTools

Package Dependency Tools

Bioconductor-mirror/pkgDepTools

Package Dependency Tools

Bioconductor-mirror/ToPASeq

Package for Topology-based Pathway Analysis of RNASeq data

singha53/pandaR

PANDA Algorithm

QuackenbushLab/pandaR

PANDA Algorithm

pandaR

PANDA Algorithm

Bioconductor-mirror/pandaR

PANDA Algorithm

mani2012/PathoStat

PathoStat Statistical Microbiome Analysis Package

PathoStat

PathoStat Statistical Microbiome Analysis Package

Bioconductor-mirror/PathoStat

PathoStat Statistical Microbiome Analysis Package

NCIgraph

Pathways from the NCI Pathways Database

Bioconductor-mirror/NCIgraph

Pathways from the NCI Pathways Database

BioPAX/paxtoolsr

PaxtoolsR: Access Pathways from Multiple Databases through BioPAX and Pathway Commons

paxtoolsr

PaxtoolsR: Access Pathways from Multiple Databases through BioPAX and Pathway Commons

cannin/paxtoolsr

PaxtoolsR: Access Pathways from Multiple Databases through BioPAX and Pathway Commons

Bioconductor-mirror/paxtoolsr

PaxtoolsR: Access Pathways from Multiple Databases through BioPAX and Pathway Commons

PCpheno

Phenotypes and cellular organizational units

Bioconductor-mirror/PCpheno

Phenotypes and cellular organizational units

Bioconductor-mirror/PANR

Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations

PANR

Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations

ProCoNA

Protein co-expression network analysis (ProCoNA).

Bioconductor-mirror/ProCoNA

Protein co-expression network analysis (ProCoNA).

Bioconductor/ppiStats

Protein-Protein Interaction Statistical Package

ppiStats

Protein-Protein Interaction Statistical Package

Bioconductor-mirror/ppiStats

Protein-Protein Interaction Statistical Package

Bioconductor-mirror/PSICQUIC

Proteomics Standard Initiative Common QUery InterfaCe

paul-shannon/PSICQUIC

Proteomics Standard Initiative Common QUery InterfaCe

PSICQUIC

Proteomics Standard Initiative Common QUery InterfaCe

Bioconductor-mirror/Rgraphviz

Provides plotting capabilities for R graph objects

kasperdanielhansen/Rgraphviz

Provides plotting capabilities for R graph objects

Rgraphviz

Provides plotting capabilities for R graph objects

alberto-valdeolivas/RandomWalkRestartMH

Random walk with restart on multiplex and heterogeneous Networks

RandomWalkRestartMH

Random walk with restart on multiplex and heterogeneous Networks

singscore

Rank-based single-sample gene set scoring method

bd2kccd/r-causal

R-Causal Library

RTN

Reconstruction of transcriptional networks and analysis of master regulators

Bioconductor-mirror/RTN

Reconstruction of transcriptional networks and analysis of master regulators

Bioconductor-mirror/pathRender

Render molecular pathways

pathRender

Render molecular pathways

waldronlab/GSEABenchmarkeR

Reproducible GSEA Benchmarking

GSEABenchmarkeR

Reproducible GSEA Benchmarking

Bioconductor-mirror/BioNet

Routines for the functional analysis of biological networks

BioNet

Routines for the functional analysis of biological networks

sincell

R package for the statistical assessment of cell state hierarchies from single-cell RNA-seq data

Bioconductor-mirror/sincell

R package for the statistical assessment of cell state hierarchies from single-cell RNA-seq data

Bioconductor-mirror/rsbml

R support for SBML, using libsbml

rsbml

R support for SBML, using libsbml

rWikiPathways

rWikiPathways - R client library for the WikiPathways API

egonw/rwikipathways

rWikiPathways - R client library for the WikiPathways API

wikipathways/rWikiPathways

rWikiPathways - R client library for the WikiPathways API

SBMLR

SBML-R Interface and Analysis Tools

Bioconductor-mirror/SBMLR

SBML-R Interface and Analysis Tools

EnrichmentBrowser

Seamless navigation through combined results of set-based and network-based enrichment analysis

Bioconductor-mirror/EnrichmentBrowser

Seamless navigation through combined results of set-based and network-based enrichment analysis

lgeistlinger/EnrichmentBrowser

Seamless navigation through combined results of set-based and network-based enrichment analysis

jdgagnon/plotGrouper

Shiny app GUI wrapper for ggplot with built-in statistical analysis

plotGrouper

Shiny app GUI wrapper for ggplot with built-in statistical analysis

SPIA

Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations

Bioconductor-mirror/SPIA

Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations

Matteo-Ciciani/scudo

Signature-based Clustering for Diagnostic Purposes

Matteo-Ciciani/rScudo

Signature-based Clustering for Diagnostic Purposes

CMPG/signet

signet: Selection Inference in Gene NETworks

signet

signet: Selection Inference in Gene NETworks

tallulandrews/scTarNet

Single-cell Targetted Network Inference

Bioconductor-mirror/spade

SPADE -- An analysis and visualization tool for Flow Cytometry

RTNsurvival

Survival analysis using transcriptional networks inferred by the RTN package

Bioconductor-mirror/RTNsurvival

Survival analysis using transcriptional networks inferred by the RTN package

csgroen/RTNsurvival

Survival analysis using transcriptional networks inferred by the RTN package

SLGI

Synthetic Lethal Genetic Interaction

Bioconductor-mirror/SLGI

Synthetic Lethal Genetic Interaction

ternarynet

Ternary Network Estimation

mccallm/ternarynet

Ternary Network Estimation

Bioconductor-mirror/ternarynet

Ternary Network Estimation

Bioconductor-mirror/splineTCDiffExpr

Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction

Bioconductor-mirror/splineTimeR

Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction

ZytoHMGU/splineTimeR

Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction

splineTimeR

Bioconductor-mirror/GOstats

Tools for manipulating GO and microarrays

Bioconductor/GOstats

Tools for manipulating GO and microarrays

GOstats

Tools for manipulating GO and microarrays

lgeistlinger/ToPASeq

Topology-based pathway analysis of RNA-seq data

ToPASeq

Topology-based pathway analysis of RNA-seq data

transcriptogramer

Transcriptional analysis based on transcriptograms

arthurvinx/transcriptogramer

Transcriptional analysis based on transcriptograms

BIMIB-DISCo/TRONCO

TRONCO, an R package for TRanslational ONCOlogy

Bioconductor-mirror/TRONCO

TRONCO, an R package for TRanslational ONCOlogy

TRONCO

TRONCO, an R package for TRanslational ONCOlogy

Bioconductor-mirror/DEGraph

Two-sample tests on a graph

DEGraph

Two-sample tests on a graph

superOmics/sparsenetgls

Using Gaussian graphical structue learning estimation in generalized least squared regression for multivariate normal regression

sparsenetgls

Using Gaussian graphical structue learning estimation in generalized least squared regression for multivariate normal regression

KEGGlincs

Visualize all edges within a KEGG pathway and overlay LINCS data [option]

uc-bd2k/KEGGlincs

Visualize all edges within a KEGG pathway and overlay LINCS data [option]

shanawhite-UC/KEGGlincs

Visualize all edges within a KEGG pathway and overlay LINCS data [option]

Bioconductor-mirror/KEGGlincs

Visualize all edges within a KEGG pathway and overlay LINCS data [option]

hyperdraw

Visualizing Hypergaphs

Bioconductor-mirror/hyperdraw

Visualizing Hypergaphs

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