This package provides functions for differential gene expression analysis of gene expression time-course data. Natural cubic spline regression models are used. Identified genes may further be used for pathway enrichment analysis and/or the reconstruction of time dependent gene regulatory association networks.
|Bioconductor views||DifferentialExpression GeneExpression GeneSetEnrichment GraphAndNetwork NetworkEnrichment NetworkInference Regression TimeCourse|
|Date of publication||None|
|Maintainer||Herbert Braselmann <firstname.lastname@example.org>|
networkProperties: Scale-free properties of a network
pathEnrich: Pathway enrichment analysis
splineDiffExprs: Differential expression analysis based on natural cubic...
splineNetRecon: Network reconstruction based on partial correlation method...
splinePlot: Plot spline regression curves of time-course data
TCsimData: Simulated time-course gene expression data set
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