ZytoHMGU/splineTimeR: Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction

This package provides functions for differential gene expression analysis of gene expression time-course data. Natural cubic spline regression models are used. Identified genes may further be used for pathway enrichment analysis and/or the reconstruction of time dependent gene regulatory association networks.

Getting started

Package details

AuthorAgata Michna
Bioconductor views DifferentialExpression GeneExpression GeneSetEnrichment GraphAndNetwork NetworkEnrichment NetworkInference Regression TimeCourse
MaintainerHerbert Braselmann <[email protected]>
LicenseGPL-3
Version1.9.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("ZytoHMGU/splineTimeR")
ZytoHMGU/splineTimeR documentation built on May 17, 2019, 11:06 a.m.