The EnrichmentBrowser package implements essential functionality for the enrichment analysis of gene expression data. The analysis combines the advantages of set-based and network-based enrichment analysis in order to derive high-confidence gene sets and biological pathways that are differentially regulated in the expression data under investigation. Besides, the package facilitates the visualization and exploration of such sets and pathways.
|Author||Ludwig Geistlinger [aut, cre], Gergely Csaba [aut], Mara Santarelli [ctb], Mirko Signorelli [ctb], Marcel Ramos [ctb], Levi Waldron [ctb], Ralf Zimmer [aut]|
|Bioconductor views||DifferentialExpression GeneExpression GeneSetEnrichment GraphAndNetwork ImmunoOncology Microarray Network NetworkEnrichment Pathways RNASeq ReportWriting Visualization|
|Maintainer||Ludwig Geistlinger <Ludwig_Geistlinger@hms.harvard.edu>|
|Package repository||View on GitHub|
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