ibh: Interaction Based Homogeneity for Evaluating Gene Lists

This package contains methods for calculating Interaction Based Homogeneity to evaluate fitness of gene lists to an interaction network which is useful for evaluation of clustering results and gene list analysis. BioGRID interactions are used in the calculation. The user can also provide their own interactions.

Package details

AuthorKircicegi Korkmaz, Volkan Atalay, Rengul Cetin Atalay.
Bioconductor views DataImport GraphAndNetwork NetworkEnrichment QualityControl
MaintainerKircicegi Korkmaz <e102771@ceng.metu.edu.tr>
LicenseGPL (>= 2)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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ibh documentation built on Nov. 8, 2020, 7:49 p.m.