ibh: Calculate interaction based homogeneity for the given gene...

Description Usage Arguments Value Author(s) See Also Examples

Description

This function calculates interaction based homogeneity of the given gene list according to the interaction list

Usage

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ibh(interactionList, geneList)

Arguments

interactionList

List containing the interactions. For each gene/protein, the is an entry in the list with "name" containing name of the gen/protein and "interactors" containing the list of genes/proteins interacting with it.

geneList

List of genes/proteins for which interaction based homogeneity is evaluated.

Value

Interaction based homogeneity value as float

Author(s)

Kircicegi Korkmaz

See Also

ibhForMultipleGeneLists

Examples

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	require(simpIntLists)
	data(ArabidopsisBioGRIDInteractionEntrezId)
	geneList <-  list(839226,817241, 824340, 832179, 818561, 831145, 838782, 826404);
	ibh(ArabidopsisBioGRIDInteractionEntrezId,geneList);


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