ibhForMultipleGeneLists: Calculate interaction based homogeneity for multiple gene...

Description Usage Arguments Value Author(s) See Also Examples

View source: R/ibh.R

Description

This function calculated interactios based homogeneity for multiple gene lists according to the interaction list

Usage

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ibhForMultipleGeneLists(interactionList, listofGeneList)

Arguments

interactionList

List containing the interactions. For each gene/protein, the is an entry in the list with "name" containing name of the gen/protein and "interactors" containing the list of genes/proteins interacting with it.

listofGeneList

List of list of genes/proteins for which interaction based homogeneity is evaluated.

Value

A vector of floats representing interaction based homogeneity for each list

Author(s)

Kircicegi Korkmaz

See Also

ibh

Examples

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	require(simpIntLists)
	data(ArabidopsisBioGRIDInteractionEntrezId)
	listofGeneList <- list(list(839226,817241, 824340, 832179, 818561, 
					831145, 838782, 826404), 
                        list( 832018, 839226, 839226, 838824));
	ibhForMultipleGeneLists(
			ArabidopsisBioGRIDInteractionEntrezId, listofGeneList)

ibh documentation built on Nov. 8, 2020, 7:49 p.m.