KEGGgraph: KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor

KEGGGraph is an interface between KEGG pathway and graph object as well as a collection of tools to analyze, dissect and visualize these graphs. It parses the regularly updated KGML (KEGG XML) files into graph models maintaining all essential pathway attributes. The package offers functionalities including parsing, graph operation, visualization and etc.

Package details

AuthorJitao David Zhang, with inputs from Paul Shannon
Bioconductor views GraphAndNetwork KEGG Pathways Visualization
MaintainerJitao David Zhang <>
LicenseGPL (>= 2)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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KEGGgraph documentation built on Nov. 8, 2020, 5:42 p.m.