KEGGEdgeSubtype: Predefinitions of node or edge types

In KEGGgraph: KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor

Description

The KGML files define node and edge type and subtypes, which are summarized in these data frames.

Usage

data(KEGGEdgeSubtype)
data(KEGGNodeType)
data(KEGGEdgeType)

Format

They are stored as data frames

Details

They are used by graph render functions to identify different types of objects, user could use them to classify edges or nodes.

References

KGML Document manual http://www.genome.jp/kegg/docs/xml/

Examples

data(KEGGEdgeSubtype)
data(KEGGEdgeType)
data(KEGGNodeType)

Example output

Attaching package: 'KEGGgraph'

The following object is masked from 'package:graphics':

    plot

KEGGgraph documentation built on Nov. 8, 2020, 5:42 p.m.