The package provides a set of R functions for interacting with BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) molecular interaction database that are hosted by the Computational Biology Center at Memorial Sloan-Kettering Cancer Center (MSKCC). Pathway Commons databases include: BIND, BioGRID, CORUM, CTD, DIP, DrugBank, HPRD, HumanCyc, IntAct, KEGG, MirTarBase, Panther, PhosphoSitePlus, Reactome, RECON, TRANSFAC.
|Bioconductor views||GeneSetEnrichment GraphAndNetwork KEGG Network NetworkEnrichment Pathways Reactome Software SystemsBiology|
|Maintainer||Augustin Luna <[email protected]>|
|Package repository||View on GitHub|
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