readSifnx: Read in a Extended SIF file
In cannin/paxtoolsr: Access Pathways from Multiple Databases Through BioPAX and Pathway Commons
readSifnx R Documentation
Read in a Extended SIF file
Description
Read in a Extended SIF file
Usage
readSifnx(inputFile)
Arguments
inputFile
an inputFile
Details
SIFNX files from Pathway Commons commonly come a single file that
includes a tab-delimited sections for nodes and another for edges. The
sections are separated by an empty lines. These sections must be split before
they are read.
Value
a list with nodes and edges entries
Examples
results <- readSifnx(system.file("extdata", "test_sifnx.txt", package="paxtoolsr"))
cannin/paxtoolsr documentation built on Feb. 2, 2023, 11:44 a.m.
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| readSifnx | R Documentation |
Read in a Extended SIF file
Description
Read in a Extended SIF file
Usage
readSifnx(inputFile)
Arguments
inputFile |
an inputFile |
Details
SIFNX files from Pathway Commons commonly come a single file that includes a tab-delimited sections for nodes and another for edges. The sections are separated by an empty lines. These sections must be split before they are read.
Value
a list with nodes and edges entries
Examples
results <- readSifnx(system.file("extdata", "test_sifnx.txt", package="paxtoolsr"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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