summarize: Summarize a BioPAX file

View source: R/summarize.R

summarizeR Documentation

Summarize a BioPAX file

Description

This function provides a summary of BioPAX classes.

Usage

summarize(inputFile)

Arguments

inputFile

a string of the name of the input BioPAX OWL file

Details

BioPAX classes are defined by the BioPAX specification: http://www.biopax.org/

Value

list with BioPAX class counts

Examples

summary <- summarize(system.file("extdata", "raf_map_kinase_cascade_reactome.owl", 
package="paxtoolsr")) 


cannin/paxtoolsr documentation built on Feb. 2, 2023, 11:44 a.m.