summarize: Summarize a BioPAX file
In cannin/paxtoolsr: Access Pathways from Multiple Databases Through BioPAX and Pathway Commons
summarize R Documentation
Summarize a BioPAX file
Description
This function provides a summary of BioPAX classes.
Usage
summarize(inputFile)
Arguments
inputFile
a string of the name of the input BioPAX OWL file
Details
BioPAX classes are defined by the BioPAX specification:
http://www.biopax.org/
Value
list with BioPAX class counts
Examples
summary <- summarize(system.file("extdata", "raf_map_kinase_cascade_reactome.owl",
package="paxtoolsr"))
cannin/paxtoolsr documentation built on Feb. 2, 2023, 11:44 a.m.
R Package Documentation
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| summarize | R Documentation |
Summarize a BioPAX file
Description
This function provides a summary of BioPAX classes.
Usage
summarize(inputFile)
Arguments
inputFile |
a string of the name of the input BioPAX OWL file |
Details
BioPAX classes are defined by the BioPAX specification: http://www.biopax.org/
Value
list with BioPAX class counts
Examples
summary <- summarize(system.file("extdata", "raf_map_kinase_cascade_reactome.owl",
package="paxtoolsr"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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