cbg-ethz/pathTiMEx: Joint Inference of Mutually Exclusive Driver Pathways and their Progression Dynamics
Version 0.99.0

The implementation of a waiting time model for the evolutionary order constraints among groups of mutually exclusive alterations in tumor progression. The method can be easily applied to any large cancer dataset available as a binary matrix.

Getting started

Package details

AuthorSimona Cristea <[email protected]>
Bioconductor views Clustering GraphAndNetwork Software StatisticalMethod SystemsBiology
MaintainerSimona Cristea <[email protected]>
LicenseGPL (>=2)
Version0.99.0
URL https://github.com/cbg-ethz/pathTiMEx
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("cbg-ethz/pathTiMEx")
cbg-ethz/pathTiMEx documentation built on May 12, 2017, 12:05 a.m.