cbg-ethz/pathTiMEx: Joint Inference of Mutually Exclusive Driver Pathways and their Progression Dynamics

The implementation of a waiting time model for the evolutionary order constraints among groups of mutually exclusive alterations in tumor progression. The method can be easily applied to any large cancer dataset available as a binary matrix.

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Package details

AuthorSimona Cristea <simona.constantinescu@bsse.ethz.ch>
Bioconductor views Clustering GraphAndNetwork Software StatisticalMethod SystemsBiology
MaintainerSimona Cristea <simona.constantinescu@bsse.ethz.ch>
LicenseGPL (>=2)
URL https://github.com/cbg-ethz/pathTiMEx
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
cbg-ethz/pathTiMEx documentation built on May 13, 2019, 2:03 p.m.