Files in cbg-ethz/pathTiMEx
Joint Inference of Mutually Exclusive Driver Pathways and their Progression Dynamics
.gitignore
DESCRIPTION
NAMESPACE
R/.DS_Store
R/funcsCBN.R
R/funcsOth.R
R/funcsPathTiMEx.R
R/funcsPoset.R
R/funcsSearch.R
R/funcsSims.R
R/funcsTiMEx.R
R/libraries.R
Read-and-delete-me
main.R
man/addAllGenesNotInTiMEx.Rd
man/addNoise.Rd
man/addPathBinary.Rd
man/cleanGroupys.Rd
man/clustMetrIterTiMEx.Rd
man/compareStructs.Rd
man/computeScore.Rd
man/count.duplicates.Rd
man/countPerfSims.Rd
man/doPatForCBN.Rd
man/drawSamples.Rd
man/genRandomPoset.Rd
man/generateFixedModel.Rd
man/generateRandomModel.Rd
man/generateStructureModel.Rd
man/iterTiMExBinaryMats.Rd
man/iterTiMExSims.Rd
man/make_linear_poset.Rd
man/optGroups.Rd
man/pathTiMEx-package.Rd
man/plotPoset.Rd
man/plotPosetPaths.Rd
man/returnAssignment.Rd
man/returnMetricsClust.Rd
man/runCBN.Rd
man/sampleMEPathways.Rd
man/summarizeSims.Rd
man/topologicalSort.Rd
man/trans_reduction.Rd
man/transformAndWritePoset.Rd
man/writePosetForCBN.Rd
pathTiMEx.Rproj
