keggorthology: graph support for KO, KEGG Orthology

graphical representation of the Feb 2010 KEGG Orthology. The KEGG orthology is a set of pathway IDs that are not to be confused with the KEGG ortholog IDs.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("keggorthology")
AuthorVJ Carey <stvjc@channing.harvard.edu>
Bioconductor views GraphAndNetwork KEGG Pathways Visualization
Date of publicationNone
MaintainerVJ Carey <stvjc@channing.harvard.edu>
LicenseArtistic-2.0
Version2.26.0

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
R
R/getKOtags.R R/indRender.R R/keggDF2graph.R
build
build/vignette.rds
data
data/KOgraph.rda
data/keggOrthDF.rda
inst
inst/doc
inst/doc/keggorth.R
inst/doc/keggorth.Rnw
inst/doc/keggorth.pdf
inst/keggHTML
inst/keggHTML/PRE2010
inst/keggHTML/PRE2010/ko00001.keg
inst/keggHTML/dfWdepth.R
inst/keggHTML/get_htext.html
inst/keggHTML/get_htext_2010.html
inst/keggHTML/ko00001.keg
inst/keggHTML/parseKeg.R
inst/keggHTML/wget.keg
man
man/getKOprobes.Rd man/indRender.Rd man/keggDF2graph.Rd
vignettes
vignettes/keggorth.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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