The fcoex package implements an easy-to use interface to co-expression analysis based on the FCBF (Fast Correlation-Based Filter) algorithm. it was implemented especifically to deal with single-cell data. The modules found can be used to redefine cell populations, unrevel novel gene associations and predict gene function by guilt-by-association. The package structure is adapted from the CEMiTool package, relying on visualizations and code designed and written by CEMiTool's authors.
|Author||Tiago Lubiana [aut, cre], Helder Nakaya [aut, ths]|
|Bioconductor views||GeneExpression GraphAndNetwork ImmunoOncology Network NetworkEnrichment Pathways RNASeq SingleCell Transcriptomics mRNAMicroarray|
|Maintainer||Tiago Lubiana <firstname.lastname@example.org>|
|Package repository||View on Bioconductor|
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