Biocview "mRNAMicroarray"

An effective identification of alternative splicing events using junction arrays and RNA-Seq data
An effective identification of alternative splicing events using junction arrays and RNA-Seq data
Artificial Components Detection of Differentially Expressed Genes
Assess Differential Gene Expression Experiments with ERCC Controls
Assess Differential Gene Expression Experiments with ERCC Controls
Assess Differential Gene Expression Experiments with ERCC Controls
Assess Differential Gene Expression Experiments with ERCC Controls
A tool to use GO Subtrees to Tag and Annotate Genes within a set
A tool to use GO Subtrees to Tag and Annotate Genes within a set
Base NanoString Experiment Class
Co-expression Modules identification Tool
Co-expression Modules identification Tool
CommunityAMARETTO: A Computational Tool for the Discovery of Shared and Distinct Regulatory Mechanisms Across Biological Systems
Decomposing Heterogeneous Cohorts using Omic Data Profiling
Decomposing Heterogeneous Cohorts using Omic Data Profiling
EWCE for Multiple Gene Lists
Expression Weighted Celltype Enrichment
Expression Weighted Celltype Enrichment
FCBF-based Co-Expression Networks for Single Cells
FCBF-based Co-Expression Networks for Single Cells
FCBF-based Co-Expression Networks for Single Cells
Gene Expression Meta-analysis Visualization Tool
Gene Expression Meta-analysis Visualization Tool
GEOexplorer: a webserver for gene expression analysis and visualisation
GEOexplorer: a webserver for gene expression analysis and visualisation
GEOexplorer: a webserver for gene expression analysis and visualisation
GUI for limma Package with Affymetrix Microarrays
GUI for limma Package With Two Color Microarrays
ImagingAMARETTO: tools for interpreting multi-omics networks for relevance to clinical outcomes and radiographic and histopathology imaging-derived biomarkers
Linear Models for Microarray Data
Linear Models for Microarray Data
MAGAR: R-package to compute methylation Quantitative Trait Loci (methQTL) from DNA methylation and genotyping data
Microarray Analysis of Differential Expression
NanoString GeoMx Tools
NanoString nCounter Tools
PatchseqMap
Permutation-Based Confidence for Molecular Classification
Pipeline for augmented co-expression analysis
Pipeline for augmented co-expression analysis
Propagating Uncertainty in Microarray Analysis(including Affymetrix tranditional 3' arrays and exon arrays and Human Transcriptome Array 2.0)
Quality metrics and data processing methods for NanoString mRNA gene expression data
Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression
Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression
Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression
RNA-binding protein motif analysis
RNA-binding protein motif analysis
sigFeature: Significant feature selection using SVM-RFE & t-statistic
sigFeature: Significant feature selection using SVM-RFE & t-statistic
The Discordant Method: A Novel Approach for Differential Correlation
The Discordant Method: A Novel Approach for Differential Correlation
Top Confident Effect Sizes
Top Confident Effect Sizes