transite: RNA-binding protein motif analysis

transite is a computational method that allows comprehensive analysis of the regulatory role of RNA-binding proteins in various cellular processes by leveraging preexisting gene expression data and current knowledge of binding preferences of RNA-binding proteins.

Package details

AuthorKonstantin Krismer [aut, cre, cph] (<https://orcid.org/0000-0001-8994-3416>), Anna Gattinger [aut] (<https://orcid.org/0000-0001-7094-9279>), Michael Yaffe [ths, cph] (<https://orcid.org/0000-0002-9547-3251>), Ian Cannell [ths] (<https://orcid.org/0000-0001-5832-9210>)
Bioconductor views DifferentialExpression GeneExpression GeneSetEnrichment Genetics Microarray Transcription mRNAMicroarray
MaintainerKonstantin Krismer <krismer@mit.edu>
LicenseMIT + file LICENSE
Version1.8.0
URL https://transite.mit.edu
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("transite")

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transite documentation built on Nov. 8, 2020, 5:27 p.m.