NanoStringQCPro provides a set of quality metrics that can be used to assess the quality of NanoString mRNA gene expression data -- i.e. to identify outlier probes and outlier samples. It also provides different background subtraction and normalization approaches for this data. It outputs suggestions for flagging samples/probes and an easily sharable html quality control output.
|Author||Dorothee Nickles <[email protected]>, Thomas Sandmann <[email protected]>, Robert Ziman <[email protected]>, Richard Bourgon <[email protected]>|
|Bioconductor views||Microarray Normalization Preprocessing QualityControl ReportWriting mRNAMicroarray|
|Maintainer||Robert Ziman <[email protected]>|
|Package repository||View on Bioconductor|
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