NanoStringQCPro: Quality metrics and data processing methods for NanoString mRNA gene expression data
Version 1.8.0

NanoStringQCPro provides a set of quality metrics that can be used to assess the quality of NanoString mRNA gene expression data -- i.e. to identify outlier probes and outlier samples. It also provides different background subtraction and normalization approaches for this data. It outputs suggestions for flagging samples/probes and an easily sharable html quality control output.

Package details

AuthorDorothee Nickles <nickles.dorothee@gene.com>, Thomas Sandmann <sandmann.thomas@gene.com>, Robert Ziman <ziman.robert@gene.com>, Richard Bourgon <bourgon.richard@gene.com>
Bioconductor views Microarray Normalization Preprocessing QualityControl ReportWriting mRNAMicroarray
MaintainerRobert Ziman <ziman.robert@gene.com>
LicenseArtistic-2.0
Version1.8.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("NanoStringQCPro")

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NanoStringQCPro documentation built on May 31, 2017, 2:51 p.m.