mini_pbmc3k: Processed subset of the pbmc3k dataset from PBMC genomics
In fcoex: FCBF-based Co-Expression Networks for Single Cells

A subset with 600 sampled cells and the top 1700 variable genes from the TENxPBMCData package pbmc3k dataset.

1	data(mini_pbmc3k)

An object of class SingleCellExperiment

Preprocessed in accordance to OSCA (August 2019, https://osca.bioconductor.org/)

scater::normalized . PCA with 50 components. snn graph on the PCA space + louvain clustering to yield 8 clusters . UMAP already ran

1 2	data(mini_pbmc3k) mini_pbmc3k

fcoex documentation built on Nov. 8, 2020, 6:45 p.m.

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README.md fcoex: co-expression for single-cell data

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