csbl-usp/CEMiTool: Co-expression Modules identification Tool
The CEMiTool package unifies the discovery and the analysis of coexpression gene modules in a fully automatic manner, while providing a user-friendly html report with high quality graphs. Our tool evaluates if modules contain genes that are over-represented by specific pathways or that are altered in a specific sample group. Additionally, CEMiTool is able to integrate transcriptomic data with interactome information, identifying the potential hubs on each network.
Getting started
Browse package contents
Package details |
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| Bioconductor views | GeneExpression GraphAndNetwork ImmunoOncology Network NetworkEnrichment Pathways RNASeq Transcriptomics mRNAMicroarray |
| Maintainer | |
| License | GPL-3 |
| Version | 1.27.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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