plot_ora_single: ORA visualization for one module

In csbl-usp/CEMiTool: Co-expression Modules identification Tool

ORA visualization for one module

Description

ORA visualization for one module

Usage

plot_ora_single(
  es,
  ordr_by = "p.adjust",
  max_length = 50,
  pv_cut = 0.05,
  graph_color = "#4169E1",
  title = "Over Representation Analysis"
)

Arguments

es	a data.frame from ora function containing only one module
ordr_by	column to order the data.frame
max_length	max length of a gene set name
pv_cut	p-value cuttoff
graph_color	color of bars
title	title of the graph

Value

a list with ggplot2 object and the number of significant gene sets

csbl-usp/CEMiTool documentation built on March 27, 2024, 5:14 a.m.