gsea_data: Retrieve Gene Set Enrichment Analysis (GSEA) results
In csbl-usp/CEMiTool: Co-expression Modules identification Tool
gsea_data R Documentation
Retrieve Gene Set Enrichment Analysis (GSEA) results
Description
Retrieve Gene Set Enrichment Analysis (GSEA) results
Usage
gsea_data(cem)
## S4 method for signature 'CEMiTool'
gsea_data(cem)
Arguments
cem
Object of class CEMiTool
Value
Object of class list with GSEA data
Examples
# Get example CEMiTool object
data(cem)
# Look at example annotation file
sample_annotation(cem)
# Run GSEA on network modules
cem <- mod_gsea(cem)
# Check results
gsea_data(cem)
csbl-usp/CEMiTool documentation built on March 27, 2024, 5:14 a.m.
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| gsea_data | R Documentation |
Retrieve Gene Set Enrichment Analysis (GSEA) results
Description
Retrieve Gene Set Enrichment Analysis (GSEA) results
Usage
gsea_data(cem)
## S4 method for signature 'CEMiTool'
gsea_data(cem)
Arguments
cem |
Object of class |
Value
Object of class list with GSEA data
Examples
# Get example CEMiTool object
data(cem)
# Look at example annotation file
sample_annotation(cem)
# Run GSEA on network modules
cem <- mod_gsea(cem)
# Check results
gsea_data(cem)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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