The R package CSSN implements the two-step algorithm proposed by Jinge Yu and Xiangyu Luo that recovers spatially-varying cell-specific gene co-expression networks for single-cell spatial expression data. The packages aim to provide estimates for cell-specific gene co-expression networks as well as network predictions in tissue locations where cells are missing. CSSN can be installed in Windows, Linux, and Mac OS.
|Author||Jinge Yu, Xiangyu Luo|
|Bioconductor views||GeneExpression GraphAndNetwork Normalization StatisticalMethod|
|Maintainer||Jinge Yu <email@example.com>|
|License||GPL (>= 2)|
|Package repository||View on GitHub|
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