MOGAMUN: MOGAMUN: A Multi-Objective Genetic Algorithm to Find Active Modules in Multiplex Biological Networks

MOGAMUN is a multi-objective genetic algorithm that identifies active modules in a multiplex biological network. This allows analyzing different biological networks at the same time. MOGAMUN is based on NSGA-II (Non-Dominated Sorting Genetic Algorithm, version II), which we adapted to work on networks.

Getting started

Package details

AuthorElva-María Novoa-del-Toro [aut, cre] (<https://orcid.org/0000-0002-6135-5839>)
Bioconductor views BiomedicalInformatics Clustering DifferentialExpression GraphAndNetwork Network SystemsBiology Transcriptomics
MaintainerElva-María Novoa-del-Toro <elvanov@hotmail.com>
LicenseGPL-3 + file LICENSE
Version1.0.1
URL https://github.com/elvanov/MOGAMUN
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MOGAMUN")

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MOGAMUN documentation built on Feb. 14, 2021, 2 a.m.