ppiStats: Protein-Protein Interaction Statistical Package

Tools for the analysis of protein interaction data.

AuthorT. Chiang and D. Scholtens with contributions from W. Huber and L. Wang
Date of publicationNone
MaintainerBioconductor Package Maintainer <maintainer@bioconductor.org>
LicenseArtistic-2.0
Version1.40.0

View on Bioconductor

Functions

assessSymmetry Man page
bpMatrix Man page
calcInOutDegStats Man page
createSummaryTables Man page
degreeEstimates Man page
degreePMF Man page
estErrProbMethodOfMoments Man page
estimateCCMErrorRates Man page
estimatePPIErrorRates Man page
findAdjacent Man page
findDegree Man page
genBPGraph Man page
idHomodimers Man page
idStochastic Man page
idSystematic Man page
idViableProteins Man page
inOutScatterCharts Man page
makeBinVect Man page
nullDistDoublyTestedEdges Man page
ppiBuildParams4GO Man page
ppiBuildParams4PFAM Man page
ppiHGTest4GO Man page
ppiHGTest4PFAM Man page
separateExptBySize Man page
twowayPERM Man page
twPERM Man page
viabilityCharts Man page

Files

ppiStats/DESCRIPTION
ppiStats/NAMESPACE
ppiStats/R
ppiStats/R/assessSymmetry.R ppiStats/R/bpMatrix.R ppiStats/R/calcInOutDegStats.R ppiStats/R/degreeEstimates.R ppiStats/R/estErrProbMethodOfMoments.R ppiStats/R/estimateCCMErrorRates.R ppiStats/R/estimatePPIErrorRates.R ppiStats/R/findAdjacent.R ppiStats/R/genBPGraph.R ppiStats/R/idHomodimers.R ppiStats/R/idStochastic.R ppiStats/R/idSystematic.R ppiStats/R/idViableProteins.R ppiStats/R/nullDistDoublyTestedEdges.R ppiStats/R/ppiHGTest.R ppiStats/R/separateExptBySize.R ppiStats/R/sumStatCharts.R ppiStats/R/twPERM.R
ppiStats/build
ppiStats/build/vignette.rds
ppiStats/inst
ppiStats/inst/Scripts
ppiStats/inst/Scripts/hgGO.R
ppiStats/inst/Scripts/hgPfam.R
ppiStats/inst/doc
ppiStats/inst/doc/ppiStats.R
ppiStats/inst/doc/ppiStats.Rnw
ppiStats/inst/doc/ppiStats.pdf
ppiStats/inst/extdata
ppiStats/inst/extdata/PPI_18052006.tab
ppiStats/inst/extdata/PPIpos
ppiStats/inst/extdata/intacty2hppMatrix.rda
ppiStats/inst/extdata/supp.Rnw
ppiStats/inst/extdata/zzz.R
ppiStats/man
ppiStats/man/assessSymmetry.Rd ppiStats/man/bpMatrix.Rd ppiStats/man/calcInOutDegStats.Rd ppiStats/man/createSummaryTables.Rd ppiStats/man/degreeEstimates.Rd ppiStats/man/estErrProbMethodOfMoments.Rd ppiStats/man/estimateCCMErrorRates.Rd ppiStats/man/estimatePPIErrorRates.Rd ppiStats/man/findAdjacent.Rd ppiStats/man/genBPGraph.Rd ppiStats/man/hgParams.Rd ppiStats/man/hgTests.Rd ppiStats/man/idProteinErrorType.Rd ppiStats/man/idProteinType.Rd ppiStats/man/inOutScatterCharts.Rd ppiStats/man/nullDistDoublyTestedEdges.Rd ppiStats/man/separateExptBySize.Rd ppiStats/man/twPERM.Rd ppiStats/man/viabilityCharts.Rd
ppiStats/vignettes
ppiStats/vignettes/ppiStats.Rnw
ppiStats/vignettes/proteinReview.bib

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.