createSummaryTables: A function to create summary statistic tables for directed...

Description Usage Arguments Value Author(s) Examples

View source: R/sumStatCharts.R

Description

This function takes a list of directed graph objects and creates a summary table based on the directed connectivity.

Usage

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createSummaryTables(dataGraphs)

Arguments

dataGraphs

A named list of directed graphNELs

Value

A dataframe with the rows indexed by the names of each directed graphNEL and the columns indexed by viable baits (VB), viable prey (VP), viable bait/prey (VBP), the ratio of viable bait/prey by viable baits (VBP/VB), the ratio of viable prey by viable baits (VP/VB), the total number of directed interactions (TI), and the ratio of total intractions by viable baits (TI/VB).

Author(s)

T Chiang

Examples

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graphs = lapply(bpExperimentNames, function(x) get(x))
names(graphs) = bpExperimentNames
createSummaryTables(graphs)

ppiStats documentation built on Nov. 1, 2018, 3:50 a.m.