createSummaryTables: A function to create summary statistic tables for directed...
In ppiStats: Protein-Protein Interaction Statistical Package
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/sumStatCharts.R
Description
This function takes a list of directed graph objects and creates a summary table
based on the directed connectivity.
Usage
1
createSummaryTables(dataGraphs)
Arguments
dataGraphs
A named list of directed graphNELs
Value
A dataframe with the rows indexed by the names of each directed graphNEL
and the columns indexed by viable baits (VB), viable prey (VP), viable bait/prey
(VBP), the ratio of viable bait/prey by viable baits (VBP/VB), the ratio of viable
prey by viable baits (VP/VB), the total number of directed interactions (TI), and
the ratio of total intractions by viable baits (TI/VB).
Author(s)
T Chiang
Examples
1
2
3
graphs = lapply(bpExperimentNames, function(x) get(x))
names(graphs) = bpExperimentNames
createSummaryTables(graphs)
ppiStats documentation built on Nov. 8, 2020, 8:18 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/sumStatCharts.R
Description
This function takes a list of directed graph objects and creates a summary table based on the directed connectivity.
Usage
1 | createSummaryTables(dataGraphs)
|
Arguments
dataGraphs |
A named list of directed graphNELs |
Value
A dataframe with the rows indexed by the names of each directed graphNEL and the columns indexed by viable baits (VB), viable prey (VP), viable bait/prey (VBP), the ratio of viable bait/prey by viable baits (VBP/VB), the ratio of viable prey by viable baits (VP/VB), the total number of directed interactions (TI), and the ratio of total intractions by viable baits (TI/VB).
Author(s)
T Chiang
Examples
1 2 3 | graphs = lapply(bpExperimentNames, function(x) get(x))
names(graphs) = bpExperimentNames
createSummaryTables(graphs)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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