NCIgraph: Pathways from the NCI Pathways Database

Provides various methods to load the pathways from the NCI Pathways Database in R graph objects and to re-format them.

AuthorLaurent Jacob
Date of publicationNone
MaintainerLaurent Jacob <laurent.jacob@gmail.com>
LicenseGPL-3
Version1.22.0

View on Bioconductor

Files in this package

NCIgraph/.BBSoptions
NCIgraph/DESCRIPTION
NCIgraph/NAMESPACE
NCIgraph/R
NCIgraph/R/allClasses.R NCIgraph/R/directedBFS.R NCIgraph/R/edgesToMerge.R NCIgraph/R/getNCIPathways.R NCIgraph/R/getSubtype.NCIgraph.R NCIgraph/R/is.NCIgraph.R NCIgraph/R/mergeNodes.R NCIgraph/R/parseNCInetwork.R NCIgraph/R/propagateRegulation.R NCIgraph/R/translateNCI2GeneID.R
NCIgraph/build
NCIgraph/build/vignette.rds
NCIgraph/data
NCIgraph/data/NCIgraphVignette.RData
NCIgraph/inst
NCIgraph/inst/COPYING
NCIgraph/inst/doc
NCIgraph/inst/doc/NCIgraph.R
NCIgraph/inst/doc/NCIgraph.Rnw
NCIgraph/inst/doc/NCIgraph.pdf
NCIgraph/inst/extdata
NCIgraph/inst/extdata/getNCIPathways.Rex
NCIgraph/inst/extdata/getSubtype.NCIgraph.Rex
NCIgraph/inst/extdata/parseNCInetwork.Rex
NCIgraph/inst/extdata/translateNCI2GeneID.Rex
NCIgraph/inst/scripts
NCIgraph/inst/scripts/generateManPages.R
NCIgraph/man
NCIgraph/man/NCI.demo.cyList.Rd NCIgraph/man/NCIgraph.Rd NCIgraph/man/directedBFS.Rd NCIgraph/man/edgesToMerge.Rd NCIgraph/man/getNCIPathways.Rd NCIgraph/man/getSubtype.NCIgraph.Rd NCIgraph/man/is.NCIgraph.Rd NCIgraph/man/mergeNodes.Rd NCIgraph/man/parseNCInetwork.Rd NCIgraph/man/propagateRegulation.Rd NCIgraph/man/translateNCI2GeneID.Rd
NCIgraph/vignettes
NCIgraph/vignettes/NCIgraph-bibli.bib
NCIgraph/vignettes/NCIgraph.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.