RefNet: A queryable collection of molecular interactions, from many sources
Version 1.12.0

Molecular interactions with metadata, some archived, some dynamically obtained

AuthorPaul Shannon
Bioconductor views GraphAndNetwork
Date of publicationNone
MaintainerPaul Shannon <pshannon@systemsbiology.org>
LicenseArtistic-2.0
Version1.12.0
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("RefNet")

Popular man pages

detectDuplicateInteractions: detectDuplicateInteractions
interactions: interactions
pickBestFromDupGroup: pickBestFromDupGroup
providerClasses: providerClasses
providers: providers
pubmedAbstract: pubmedAbstract
RefNet-class: RefNet
See all...

All man pages Function index File listing

Man pages

detectDuplicateInteractions: detectDuplicateInteractions
interactions: interactions
pickBestFromDupGroup: pickBestFromDupGroup
providerClasses: providerClasses
providers: providers
pubmedAbstract: pubmedAbstract
RefNet-class: RefNet

Functions

RefNet Man page Source code
RefNet-class Man page
\S4method{interactions}{RefNet} Man page
\S4method{providerClasses}{RefNet} Man page
\S4method{providers}{RefNet} Man page
class:RefNet Man page
combinations Source code
detectDuplicateInteractions Man page Source code
extractPubmedIDs Source code
filterOnColumnValue Source code
findHits Source code
interactions Man page
interactions,RefNet-method Man page
nteractions Source code
old.detectDuplicateInteractions Source code
pickBestFromDupGroup Man page Source code
printf Source code
providerClasses Man page
providerClasses,RefNet-method Man page
providers Man page
providers,RefNet-method Man page
pubmedAbstract Man page Source code
show,RefNet-method Man page
smartRbind Source code

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/RefNet-class.R
build
build/vignette.rds
inst
inst/apps
inst/apps/server.R
inst/apps/ui.R
inst/apps/www
inst/apps/www/bootstrap.css
inst/doc
inst/doc/RefNet.R
inst/doc/RefNet.Rnw
inst/doc/RefNet.pdf
inst/extdata
inst/extdata/tbl.28g2.RData
inst/extdata/tbl.dups.RData
inst/extdata/tbl.e2f3.RData
inst/unitTests
inst/unitTests/test_RefNet.R
man
man/RefNet-class.Rd
man/detectDuplicateInteractions.Rd
man/interactions.Rd
man/pickBestFromDupGroup.Rd
man/providerClasses.Rd
man/providers.Rd
man/pubmedAbstract.Rd
tests
tests/runTests.R
vignettes
vignettes/RefNet.Rnw
vignettes/RefNet.bib
RefNet documentation built on May 20, 2017, 9:22 p.m.

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