gaggle: Broadcast data between R and Gaggle

This package contains functions enabling data exchange between R and Gaggle enabled bioinformatics software, including Cytoscape, Firegoose and Gaggle Genome Browser.

AuthorPaul Shannon <pshannon@systemsbiology.org>
Date of publicationNone
MaintainerChristopher Bare <cbare@systemsbiology.org>
LicenseGPL version 2 or newer
Version1.42.0
http://gaggle.systemsbiology.net/docs/geese/r/

View on Bioconductor

Functions

addSingle Man page
broadcast Man page
connectToGaggle Man page
disconnectFromGaggle Man page
gaggleInit Man page
geese Man page
getCluster Man page
getJavaClassName Man page
getMatrix Man page
getNameList Man page
getNetwork Man page
getSpecies Man page
getTargetGoose Man page
getTuple Man page
getTupleAsList Man page
hideGoose Man page
newSingle Man page
newTuple Man page
setSpecies Man page
setTargetGoose Man page
showGoose Man page
testGagglePackage Man page
tupleToList Man page

Files

gaggle/DESCRIPTION
gaggle/NAMESPACE
gaggle/R
gaggle/R/gaggle.R
gaggle/build
gaggle/build/vignette.rds
gaggle/inst
gaggle/inst/doc
gaggle/inst/doc/gaggle.R
gaggle/inst/doc/gaggle.Rnw
gaggle/inst/doc/gaggle.pdf
gaggle/inst/jars
gaggle/inst/jars/gaggleRShell.jar
gaggle/inst/unitTests
gaggle/inst/unitTests/gaggleTest.R
gaggle/man
gaggle/man/broadcast.Rd gaggle/man/connectToGaggle.Rd gaggle/man/disconnectFromGaggle.Rd gaggle/man/gaggleInit.Rd gaggle/man/geese.Rd gaggle/man/getCluster.Rd gaggle/man/getJavaClassName.Rd gaggle/man/getMatrix.Rd gaggle/man/getNameList.Rd gaggle/man/getNetwork.Rd gaggle/man/getSpecies.Rd gaggle/man/getTargetGoose.Rd gaggle/man/getTuple.Rd gaggle/man/hideGoose.Rd gaggle/man/newTuple.Rd gaggle/man/setSpecies.Rd gaggle/man/setTargetGoose.Rd gaggle/man/showGoose.Rd gaggle/man/testGagglePackage.Rd
gaggle/vignettes
gaggle/vignettes/SHBN.png
gaggle/vignettes/cyRandomEGraph8.png
gaggle/vignettes/gaggle.Rnw
gaggle/vignettes/gaggleData.png
gaggle/vignettes/gaggleTarget.png
gaggle/vignettes/gooseSelectionMenu.png
gaggle/vignettes/listening.png

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.